CLANS: a Java application for visualizing protein families based on pairwise similarity
نویسندگان
چکیده
منابع مشابه
CLANS: a Java application for visualizing protein families based on pairwise similarity
SUMMARY The main source of hypotheses on the structure and function of new proteins is their homology to proteins with known properties. Homologous relationships are typically established through sequence similarity searches, multiple alignments and phylogenetic reconstruction. In cases where the number of potential relationships is large, for example in P-loop NTPases with many thousands of me...
متن کاملapplication of upfc based on svpwm for power quality improvement
در سالهای اخیر،اختلالات کیفیت توان مهمترین موضوع می باشد که محققان زیادی را برای پیدا کردن راه حلی برای حل آن علاقه مند ساخته است.امروزه کیفیت توان در سیستم قدرت برای مراکز صنعتی،تجاری وکاربردهای بیمارستانی مسئله مهمی می باشد.مشکل ولتاژمثل شرایط افت ولتاژواضافه جریان ناشی از اتصال کوتاه مدار یا وقوع خطا در سیستم بیشتر مورد توجه می باشد. برای مطالعه افت ولتاژ واضافه جریان،محققان زیادی کار کرده ...
15 صفحه اولVisualizing pairwise similarity via semidefinite programming
We introduce a novel learning algorithm for binary pairwise similarity measurements on a set of objects. The algorithm delivers an embedding of the objects into a vector representation space that strictly respects the known similarities, in the sense that objects known to be similar are always closer in the embedding than those known to be dissimilar. Subject to this constraint, our method sele...
متن کاملA Java applet for visualizing protein-protein interaction
UNLABELLED A web applet for browsing protein-protein interactions was implemented. It enables the display of interaction relationships, based upon neighboring distance and biological function. AVAILABILITY The Java applet is available at http://www.charite.de/bioinformatics
متن کاملA Clustering Method for Molecular Sequences based on Pairwise Similarity
This paper presents a method for clustering a large and mixed set of uncharacterized sequences provided by genome projects. As the measure of the clustering, we use a fast approximation of sequence similarity (FASTA score). However, in the case to detect similarity between two sequences that are much diverged in evolutionary process, FASTA sometimes underestimates the similarity compared to the...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformatics
سال: 2004
ISSN: 1367-4803,1460-2059
DOI: 10.1093/bioinformatics/bth444